STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiC_3Glutathione transport system permease protein GsiC. (319 aa)    
Predicted Functional Partners:
oppD_1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 
  0.973
gsiD_3
Glutathione transport system permease protein GsiD.
 
  0.968
oppF_2
Oligopeptide transport ATP-binding protein OppF.
 
  0.941
gsiB_2
Glutathione-binding protein GsiB precursor.
  0.929
dppC_2
Dipeptide transport system permease protein DppC.
 
 0.916
oppD_3
Oligopeptide transport ATP-binding protein OppD.
 
 
 0.873
oppC_2
Oligopeptide transport system permease protein OppC.
 
 
  0.866
ddpC_2
Putative D,D-dipeptide transport system permease protein DdpC.
 
 
  0.863
gsiD_1
Glutathione transport system permease protein GsiD.
 
 
  0.862
gsiD_5
Glutathione transport system permease protein GsiD.
 
 
  0.862
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.