Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL48001.1 | KJL48003.1 | RS84_01630 | RS84_01632 | Hypothetical protein. | Putative ABC transporter ATP-binding protein. | 0.508 |
KJL48001.1 | psaA | RS84_01630 | RS84_01633 | Hypothetical protein. | Manganese ABC transporter substrate-binding lipoprotein precursor. | 0.508 |
KJL48001.1 | znuB | RS84_01630 | RS84_01631 | Hypothetical protein. | High-affinity zinc uptake system membrane protein ZnuB. | 0.508 |
KJL48001.1 | zur | RS84_01630 | RS84_01629 | Hypothetical protein. | Zinc uptake regulation protein; Belongs to the Fur family. | 0.628 |
KJL48003.1 | KJL48001.1 | RS84_01632 | RS84_01630 | Putative ABC transporter ATP-binding protein. | Hypothetical protein. | 0.508 |
KJL48003.1 | ideR_1 | RS84_01632 | RS84_00179 | Putative ABC transporter ATP-binding protein. | Iron-dependent repressor IdeR. | 0.526 |
KJL48003.1 | ideR_2 | RS84_01632 | RS84_01412 | Putative ABC transporter ATP-binding protein. | Iron-dependent repressor IdeR. | 0.596 |
KJL48003.1 | psaA | RS84_01632 | RS84_01633 | Putative ABC transporter ATP-binding protein. | Manganese ABC transporter substrate-binding lipoprotein precursor. | 0.999 |
KJL48003.1 | znuB | RS84_01632 | RS84_01631 | Putative ABC transporter ATP-binding protein. | High-affinity zinc uptake system membrane protein ZnuB. | 0.999 |
KJL48003.1 | zur | RS84_01632 | RS84_01629 | Putative ABC transporter ATP-binding protein. | Zinc uptake regulation protein; Belongs to the Fur family. | 0.748 |
ideR_1 | KJL48003.1 | RS84_00179 | RS84_01632 | Iron-dependent repressor IdeR. | Putative ABC transporter ATP-binding protein. | 0.526 |
ideR_1 | psaA | RS84_00179 | RS84_01633 | Iron-dependent repressor IdeR. | Manganese ABC transporter substrate-binding lipoprotein precursor. | 0.537 |
ideR_1 | znuB | RS84_00179 | RS84_01631 | Iron-dependent repressor IdeR. | High-affinity zinc uptake system membrane protein ZnuB. | 0.540 |
ideR_1 | zur | RS84_00179 | RS84_01629 | Iron-dependent repressor IdeR. | Zinc uptake regulation protein; Belongs to the Fur family. | 0.667 |
ideR_2 | KJL48003.1 | RS84_01412 | RS84_01632 | Iron-dependent repressor IdeR. | Putative ABC transporter ATP-binding protein. | 0.596 |
ideR_2 | psaA | RS84_01412 | RS84_01633 | Iron-dependent repressor IdeR. | Manganese ABC transporter substrate-binding lipoprotein precursor. | 0.605 |
ideR_2 | znuB | RS84_01412 | RS84_01631 | Iron-dependent repressor IdeR. | High-affinity zinc uptake system membrane protein ZnuB. | 0.618 |
mntH_1 | znuB | RS84_01409 | RS84_01631 | Divalent metal cation transporter MntH. | High-affinity zinc uptake system membrane protein ZnuB. | 0.570 |
mntH_2 | znuB | RS84_03253 | RS84_01631 | Divalent metal cation transporter MntH. | High-affinity zinc uptake system membrane protein ZnuB. | 0.570 |
psaA | KJL48001.1 | RS84_01633 | RS84_01630 | Manganese ABC transporter substrate-binding lipoprotein precursor. | Hypothetical protein. | 0.508 |
page 1 of 3