STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmE_5Multiple sugar-binding protein precursor. (430 aa)    
Predicted Functional Partners:
araP_3
L-arabinose transport system permease protein AraP.
 
 0.994
sugB_2
Trehalose transport system permease protein SugB.
 
  0.993
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
   
  0.920
araP_5
L-arabinose transport system permease protein AraP.
  
 0.882
sugB_5
Trehalose transport system permease protein SugB.
   
  0.862
lacF_20
Lactose transport system permease protein LacF.
  
  0.849
sugB_3
Trehalose transport system permease protein SugB.
   
  0.847
araP_4
L-arabinose transport system permease protein AraP.
   
  0.845
KJL48740.1
Putative sugar-binding periplasmic protein precursor.
  
  
 
0.834
nanK_2
N-acetylmannosamine kinase.
 
     0.832
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.