Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
chvE_1 | xylG_2 | RS84_00307 | RS84_01667 | Multiple sugar-binding periplasmic receptor ChvE precursor. | Xylose import ATP-binding protein XylG. | 0.817 |
chvE_1 | xylG_3 | RS84_00307 | RS84_01670 | Multiple sugar-binding periplasmic receptor ChvE precursor. | Xylose import ATP-binding protein XylG. | 0.705 |
chvE_1 | xylH_2 | RS84_00307 | RS84_01668 | Multiple sugar-binding periplasmic receptor ChvE precursor. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.947 |
chvE_2 | nagC_6 | RS84_01666 | RS84_01669 | Multiple sugar-binding periplasmic receptor ChvE precursor. | N-acetylglucosamine repressor. | 0.486 |
chvE_2 | xylG_2 | RS84_01666 | RS84_01667 | Multiple sugar-binding periplasmic receptor ChvE precursor. | Xylose import ATP-binding protein XylG. | 0.919 |
chvE_2 | xylG_3 | RS84_01666 | RS84_01670 | Multiple sugar-binding periplasmic receptor ChvE precursor. | Xylose import ATP-binding protein XylG. | 0.842 |
chvE_2 | xylH_2 | RS84_01666 | RS84_01668 | Multiple sugar-binding periplasmic receptor ChvE precursor. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.974 |
nagC_6 | chvE_2 | RS84_01669 | RS84_01666 | N-acetylglucosamine repressor. | Multiple sugar-binding periplasmic receptor ChvE precursor. | 0.486 |
nagC_6 | xylG_2 | RS84_01669 | RS84_01667 | N-acetylglucosamine repressor. | Xylose import ATP-binding protein XylG. | 0.648 |
nagC_6 | xylG_3 | RS84_01669 | RS84_01670 | N-acetylglucosamine repressor. | Xylose import ATP-binding protein XylG. | 0.825 |
nagC_6 | xylH_2 | RS84_01669 | RS84_01668 | N-acetylglucosamine repressor. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.654 |
rbsB | rbsC | RS84_01451 | RS84_01450 | D-ribose-binding periplasmic protein precursor. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.985 |
rbsB | xylG_2 | RS84_01451 | RS84_01667 | D-ribose-binding periplasmic protein precursor. | Xylose import ATP-binding protein XylG. | 0.825 |
rbsB | xylG_3 | RS84_01451 | RS84_01670 | D-ribose-binding periplasmic protein precursor. | Xylose import ATP-binding protein XylG. | 0.907 |
rbsB | xylH_2 | RS84_01451 | RS84_01668 | D-ribose-binding periplasmic protein precursor. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.788 |
rbsB | yjfF | RS84_01451 | RS84_00876 | D-ribose-binding periplasmic protein precursor. | Inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family. | 0.923 |
rbsB | ytfT | RS84_01451 | RS84_00875 | D-ribose-binding periplasmic protein precursor. | Inner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family. | 0.945 |
rbsC | rbsB | RS84_01450 | RS84_01451 | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | D-ribose-binding periplasmic protein precursor. | 0.985 |
rbsC | xylG_2 | RS84_01450 | RS84_01667 | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | Xylose import ATP-binding protein XylG. | 0.971 |
rbsC | xylG_3 | RS84_01450 | RS84_01670 | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | Xylose import ATP-binding protein XylG. | 0.921 |
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