Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL48069.1 | KJL48071.1 | RS84_01698 | RS84_01700 | Beta-lactamase. | Nicotinamide mononucleotide transporter. | 0.457 |
KJL48069.1 | yncA_1 | RS84_01698 | RS84_01699 | Beta-lactamase. | N-acyltransferase YncA. | 0.457 |
KJL48071.1 | KJL48069.1 | RS84_01700 | RS84_01698 | Nicotinamide mononucleotide transporter. | Beta-lactamase. | 0.457 |
KJL48071.1 | yncA_1 | RS84_01700 | RS84_01699 | Nicotinamide mononucleotide transporter. | N-acyltransferase YncA. | 0.773 |
gpt | yncA_1 | RS84_02492 | RS84_01699 | Xanthine phosphoribosyltransferase. | N-acyltransferase YncA. | 0.694 |
metH | yncA_1 | RS84_02281 | RS84_01699 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | N-acyltransferase YncA. | 0.605 |
pta | yncA_1 | RS84_00073 | RS84_01699 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | N-acyltransferase YncA. | 0.514 |
yncA_1 | KJL48069.1 | RS84_01699 | RS84_01698 | N-acyltransferase YncA. | Beta-lactamase. | 0.457 |
yncA_1 | KJL48071.1 | RS84_01699 | RS84_01700 | N-acyltransferase YncA. | Nicotinamide mononucleotide transporter. | 0.773 |
yncA_1 | gpt | RS84_01699 | RS84_02492 | N-acyltransferase YncA. | Xanthine phosphoribosyltransferase. | 0.694 |
yncA_1 | metH | RS84_01699 | RS84_02281 | N-acyltransferase YncA. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.605 |
yncA_1 | pta | RS84_01699 | RS84_00073 | N-acyltransferase YncA. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.514 |