Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47136.1 | KJL47140.1 | RS84_01921 | RS84_01925 | Dioxygenase. | Hypothetical protein. | 0.417 |
KJL47136.1 | tatA_1 | RS84_01921 | RS84_01922 | Dioxygenase. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.761 |
KJL47136.1 | tatB_1 | RS84_01921 | RS84_01924 | Dioxygenase. | Sec-independent protein translocase protein TatB. | 0.756 |
KJL47136.1 | tatC | RS84_01921 | RS84_01923 | Dioxygenase. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.719 |
KJL47140.1 | KJL47136.1 | RS84_01925 | RS84_01921 | Hypothetical protein. | Dioxygenase. | 0.417 |
KJL47140.1 | KJL47141.1 | RS84_01925 | RS84_01926 | Hypothetical protein. | Fatty acid desaturase. | 0.450 |
KJL47140.1 | tatA_1 | RS84_01925 | RS84_01922 | Hypothetical protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.449 |
KJL47140.1 | tatB_1 | RS84_01925 | RS84_01924 | Hypothetical protein. | Sec-independent protein translocase protein TatB. | 0.449 |
KJL47140.1 | tatC | RS84_01925 | RS84_01923 | Hypothetical protein. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.449 |
KJL47141.1 | KJL47140.1 | RS84_01926 | RS84_01925 | Fatty acid desaturase. | Hypothetical protein. | 0.450 |
tatA_1 | KJL47136.1 | RS84_01922 | RS84_01921 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Dioxygenase. | 0.761 |
tatA_1 | KJL47140.1 | RS84_01922 | RS84_01925 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein. | 0.449 |
tatA_1 | tatB_1 | RS84_01922 | RS84_01924 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Sec-independent protein translocase protein TatB. | 0.867 |
tatA_1 | tatC | RS84_01922 | RS84_01923 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.981 |
tatB_1 | KJL47136.1 | RS84_01924 | RS84_01921 | Sec-independent protein translocase protein TatB. | Dioxygenase. | 0.756 |
tatB_1 | KJL47140.1 | RS84_01924 | RS84_01925 | Sec-independent protein translocase protein TatB. | Hypothetical protein. | 0.449 |
tatB_1 | tatA_1 | RS84_01924 | RS84_01922 | Sec-independent protein translocase protein TatB. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.867 |
tatB_1 | tatC | RS84_01924 | RS84_01923 | Sec-independent protein translocase protein TatB. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.970 |
tatC | KJL47136.1 | RS84_01923 | RS84_01921 | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Dioxygenase. | 0.719 |
tatC | KJL47140.1 | RS84_01923 | RS84_01925 | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Hypothetical protein. | 0.449 |
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