STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldHNADP-dependent fatty aldehyde dehydrogenase. (483 aa)    
Predicted Functional Partners:
KJL47178.1
Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
 
  0.967
mdlA_2
Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.850
ptsG
PTS system glucose-specific EIICBA component.
   
 
 0.826
gltB_1
Glutamate synthase [NADPH] large chain.
  
 
 0.822
yteT
Putative oxidoreductase YteT precursor.
  
 
  0.821
galE_3
UDP-glucose 4-epimerase.
 
  
  0.808
KJL47120.1
Phenylacetate-coenzyme A ligase.
    
 0.711
KJL47183.1
Hypothetical protein.
 
 
   0.645
kipI
Kinase A inhibitor.
   
 
 0.641
gabT
4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.627
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.