STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galE_3UDP-glucose 4-epimerase. (300 aa)    
Predicted Functional Partners:
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
 
  
 0.900
galE_2
UDP-glucose 4-epimerase.
 
 0.896
mdlA_2
Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.893
galT
Galactose-1-phosphate uridylyltransferase.
   
 
 0.873
KJL47178.1
Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
     0.860
yteT
Putative oxidoreductase YteT precursor.
 
 
  0.856
glf
UDP-galactopyranose mutase.
  
 
 0.852
tuaD
UDP-glucose 6-dehydrogenase TuaD.
  
  0.841
ywqF
UDP-glucose 6-dehydrogenase YwqF.
  
  0.841
aldH
NADP-dependent fatty aldehyde dehydrogenase.
 
  
  0.808
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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