STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL47183.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
ydgJ
Putative oxidoreductase YdgJ.
 
     0.975
yteT
Putative oxidoreductase YteT precursor.
 
     0.789
ccpA_8
Catabolite control protein A.
      0.788
xynB_2
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
       0.773
KJL47184.1
Beta-lactamase.
       0.773
ptsG
PTS system glucose-specific EIICBA component.
    
 0.724
yesO_3
Putative ABC transporter substrate-binding protein YesO.
  
     0.719
gltB_1
Glutamate synthase [NADPH] large chain.
    
 
 0.705
galE_3
UDP-glucose 4-epimerase.
 
     0.694
KJL47178.1
Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
     0.693
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.