Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47229.1 | KJL47230.1 | RS84_02018 | RS84_02019 | Cyclohexadienyl dehydrogenase. | Xylose isomerase-like TIM barrel. | 0.961 |
KJL47229.1 | fabG_5 | RS84_02018 | RS84_02017 | Cyclohexadienyl dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.851 |
KJL47229.1 | lutR_5 | RS84_02018 | RS84_02024 | Cyclohexadienyl dehydrogenase. | HTH-type transcriptional regulator LutR. | 0.815 |
KJL47229.1 | rihA | RS84_02018 | RS84_02025 | Cyclohexadienyl dehydrogenase. | Pyrimidine-specific ribonucleoside hydrolase RihA. | 0.551 |
KJL47230.1 | KJL47229.1 | RS84_02019 | RS84_02018 | Xylose isomerase-like TIM barrel. | Cyclohexadienyl dehydrogenase. | 0.961 |
KJL47230.1 | fabG_5 | RS84_02019 | RS84_02017 | Xylose isomerase-like TIM barrel. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.848 |
KJL47230.1 | lutR_5 | RS84_02019 | RS84_02024 | Xylose isomerase-like TIM barrel. | HTH-type transcriptional regulator LutR. | 0.837 |
KJL47230.1 | rihA | RS84_02019 | RS84_02025 | Xylose isomerase-like TIM barrel. | Pyrimidine-specific ribonucleoside hydrolase RihA. | 0.574 |
KJL48936.1 | lutR_5 | RS84_00566 | RS84_02024 | Transcriptional regulator PdhR. | HTH-type transcriptional regulator LutR. | 0.711 |
KJL48936.1 | mcbR_2 | RS84_00566 | RS84_01096 | Transcriptional regulator PdhR. | HTH-type transcriptional regulator McbR. | 0.772 |
KJL48936.1 | ydfH_1 | RS84_00566 | RS84_00632 | Transcriptional regulator PdhR. | Putative HTH-type transcriptional regulator YdfH. | 0.763 |
KJL48936.1 | ydfH_5 | RS84_00566 | RS84_02167 | Transcriptional regulator PdhR. | Putative HTH-type transcriptional regulator YdfH. | 0.772 |
fabG_5 | KJL47229.1 | RS84_02017 | RS84_02018 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | Cyclohexadienyl dehydrogenase. | 0.851 |
fabG_5 | KJL47230.1 | RS84_02017 | RS84_02019 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | Xylose isomerase-like TIM barrel. | 0.848 |
fabG_5 | lutR_5 | RS84_02017 | RS84_02024 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | HTH-type transcriptional regulator LutR. | 0.649 |
fabG_5 | rihA | RS84_02017 | RS84_02025 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | Pyrimidine-specific ribonucleoside hydrolase RihA. | 0.480 |
lutR_5 | KJL47229.1 | RS84_02024 | RS84_02018 | HTH-type transcriptional regulator LutR. | Cyclohexadienyl dehydrogenase. | 0.815 |
lutR_5 | KJL47230.1 | RS84_02024 | RS84_02019 | HTH-type transcriptional regulator LutR. | Xylose isomerase-like TIM barrel. | 0.837 |
lutR_5 | KJL48936.1 | RS84_02024 | RS84_00566 | HTH-type transcriptional regulator LutR. | Transcriptional regulator PdhR. | 0.711 |
lutR_5 | fabG_5 | RS84_02024 | RS84_02017 | HTH-type transcriptional regulator LutR. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.649 |
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