Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47131.1 | yesX_2 | RS84_01916 | RS84_02028 | Fibronectin type III domain protein. | Rhamnogalacturonan exolyase YesX. | 0.592 |
KJL47242.1 | yesO_2 | RS84_02031 | RS84_02032 | Putative multidrug export ATP-binding/permease protein. | Putative ABC transporter substrate-binding protein YesO. | 0.753 |
KJL47242.1 | yesX_2 | RS84_02031 | RS84_02028 | Putative multidrug export ATP-binding/permease protein. | Rhamnogalacturonan exolyase YesX. | 0.670 |
KJL48646.1 | KJL48689.1 | RS84_00813 | RS84_00856 | Hypothetical protein. | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | 0.446 |
KJL48646.1 | abn-ts | RS84_00813 | RS84_00834 | Hypothetical protein. | Intracellular endo-alpha-(1->5)-L-arabinanase. | 0.586 |
KJL48646.1 | pelA_1 | RS84_00813 | RS84_03214 | Hypothetical protein. | Pectate trisaccharide-lyase precursor. | 0.640 |
KJL48646.1 | pelA_2 | RS84_00813 | RS84_03215 | Hypothetical protein. | Pectate trisaccharide-lyase precursor. | 0.717 |
KJL48646.1 | xynB_2 | RS84_00813 | RS84_01970 | Hypothetical protein. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.647 |
KJL48646.1 | xynZ | RS84_00813 | RS84_01869 | Hypothetical protein. | Endo-1,4-beta-xylanase Z precursor. | 0.602 |
KJL48646.1 | yesX_2 | RS84_00813 | RS84_02028 | Hypothetical protein. | Rhamnogalacturonan exolyase YesX. | 0.670 |
KJL48689.1 | KJL48646.1 | RS84_00856 | RS84_00813 | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | Hypothetical protein. | 0.446 |
KJL48689.1 | abn-ts | RS84_00856 | RS84_00834 | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | Intracellular endo-alpha-(1->5)-L-arabinanase. | 0.775 |
KJL48689.1 | pelA_1 | RS84_00856 | RS84_03214 | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | Pectate trisaccharide-lyase precursor. | 0.608 |
KJL48689.1 | pelA_2 | RS84_00856 | RS84_03215 | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | Pectate trisaccharide-lyase precursor. | 0.595 |
KJL48689.1 | xynB_2 | RS84_00856 | RS84_01970 | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.677 |
KJL48689.1 | xynZ | RS84_00856 | RS84_01869 | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | Endo-1,4-beta-xylanase Z precursor. | 0.512 |
KJL48689.1 | yesX_2 | RS84_00856 | RS84_02028 | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | Rhamnogalacturonan exolyase YesX. | 0.671 |
abn-ts | KJL48646.1 | RS84_00834 | RS84_00813 | Intracellular endo-alpha-(1->5)-L-arabinanase. | Hypothetical protein. | 0.586 |
abn-ts | KJL48689.1 | RS84_00834 | RS84_00856 | Intracellular endo-alpha-(1->5)-L-arabinanase. | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. | 0.775 |
abn-ts | pelA_1 | RS84_00834 | RS84_03214 | Intracellular endo-alpha-(1->5)-L-arabinanase. | Pectate trisaccharide-lyase precursor. | 0.711 |
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