Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47248.1 | betI_8 | RS84_02038 | RS84_02039 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.566 |
KJL47251.1 | KJL47256.1 | RS84_02041 | RS84_02046 | Hypothetical protein; Belongs to the UPF0311 family. | Hypothetical protein. | 0.642 |
KJL47251.1 | betI_8 | RS84_02041 | RS84_02039 | Hypothetical protein; Belongs to the UPF0311 family. | HTH-type transcriptional regulator BetI. | 0.628 |
KJL47251.1 | cocE | RS84_02041 | RS84_02040 | Hypothetical protein; Belongs to the UPF0311 family. | Cocaine esterase. | 0.896 |
KJL47251.1 | gsiA_5 | RS84_02041 | RS84_02045 | Hypothetical protein; Belongs to the UPF0311 family. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.633 |
KJL47251.1 | gsiD_5 | RS84_02041 | RS84_02044 | Hypothetical protein; Belongs to the UPF0311 family. | Glutathione transport system permease protein GsiD. | 0.679 |
KJL47251.1 | mppA | RS84_02041 | RS84_02042 | Hypothetical protein; Belongs to the UPF0311 family. | Periplasmic murein peptide-binding protein precursor. | 0.819 |
KJL47251.1 | oppB | RS84_02041 | RS84_02043 | Hypothetical protein; Belongs to the UPF0311 family. | Oligopeptide transport system permease protein OppB. | 0.677 |
KJL47256.1 | KJL47251.1 | RS84_02046 | RS84_02041 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0311 family. | 0.642 |
KJL47256.1 | betI_8 | RS84_02046 | RS84_02039 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.537 |
KJL47256.1 | cocE | RS84_02046 | RS84_02040 | Hypothetical protein. | Cocaine esterase. | 0.823 |
KJL47256.1 | gsiA_5 | RS84_02046 | RS84_02045 | Hypothetical protein. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.741 |
KJL47256.1 | gsiD_5 | RS84_02046 | RS84_02044 | Hypothetical protein. | Glutathione transport system permease protein GsiD. | 0.772 |
KJL47256.1 | mppA | RS84_02046 | RS84_02042 | Hypothetical protein. | Periplasmic murein peptide-binding protein precursor. | 0.885 |
KJL47256.1 | oppB | RS84_02046 | RS84_02043 | Hypothetical protein. | Oligopeptide transport system permease protein OppB. | 0.741 |
KJL47304.1 | betI_8 | RS84_02094 | RS84_02039 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.619 |
KJL47304.1 | cocE | RS84_02094 | RS84_02040 | Hypothetical protein. | Cocaine esterase. | 0.541 |
KJL47304.1 | mppA | RS84_02094 | RS84_02042 | Hypothetical protein. | Periplasmic murein peptide-binding protein precursor. | 0.411 |
KJL47304.1 | nodD2_1 | RS84_02094 | RS84_02095 | Hypothetical protein. | Nodulation protein D 2; Belongs to the LysR transcriptional regulatory family. | 0.469 |
betI_8 | KJL47248.1 | RS84_02039 | RS84_02038 | HTH-type transcriptional regulator BetI. | Hypothetical protein. | 0.566 |
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