Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47051.1 | afr_5 | RS84_03698 | RS84_02051 | Trehalose utilization. | 1,5-anhydro-D-fructose reductase. | 0.658 |
KJL47051.1 | iolE_2 | RS84_03698 | RS84_02050 | Trehalose utilization. | Inosose dehydratase. | 0.434 |
KJL47258.1 | KJL47259.1 | RS84_02048 | RS84_02049 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL47258.1 | afr_5 | RS84_02048 | RS84_02051 | Hypothetical protein. | 1,5-anhydro-D-fructose reductase. | 0.572 |
KJL47258.1 | iolE_2 | RS84_02048 | RS84_02050 | Hypothetical protein. | Inosose dehydratase. | 0.572 |
KJL47259.1 | KJL47258.1 | RS84_02049 | RS84_02048 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL47259.1 | afr_5 | RS84_02049 | RS84_02051 | Hypothetical protein. | 1,5-anhydro-D-fructose reductase. | 0.572 |
KJL47259.1 | iolE_2 | RS84_02049 | RS84_02050 | Hypothetical protein. | Inosose dehydratase. | 0.572 |
afr_3 | afr_5 | RS84_01085 | RS84_02051 | 1,5-anhydro-D-fructose reductase. | 1,5-anhydro-D-fructose reductase. | 0.689 |
afr_3 | afr_6 | RS84_01085 | RS84_02140 | 1,5-anhydro-D-fructose reductase. | 1,5-anhydro-D-fructose reductase. | 0.788 |
afr_3 | galK | RS84_01085 | RS84_00979 | 1,5-anhydro-D-fructose reductase. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.566 |
afr_3 | gfo | RS84_01085 | RS84_01084 | 1,5-anhydro-D-fructose reductase. | Glucose--fructose oxidoreductase precursor. | 0.839 |
afr_3 | iolE_1 | RS84_01085 | RS84_00890 | 1,5-anhydro-D-fructose reductase. | Inosose dehydratase. | 0.760 |
afr_5 | KJL47051.1 | RS84_02051 | RS84_03698 | 1,5-anhydro-D-fructose reductase. | Trehalose utilization. | 0.658 |
afr_5 | KJL47258.1 | RS84_02051 | RS84_02048 | 1,5-anhydro-D-fructose reductase. | Hypothetical protein. | 0.572 |
afr_5 | KJL47259.1 | RS84_02051 | RS84_02049 | 1,5-anhydro-D-fructose reductase. | Hypothetical protein. | 0.572 |
afr_5 | afr_3 | RS84_02051 | RS84_01085 | 1,5-anhydro-D-fructose reductase. | 1,5-anhydro-D-fructose reductase. | 0.689 |
afr_5 | afr_6 | RS84_02051 | RS84_02140 | 1,5-anhydro-D-fructose reductase. | 1,5-anhydro-D-fructose reductase. | 0.610 |
afr_5 | galK | RS84_02051 | RS84_00979 | 1,5-anhydro-D-fructose reductase. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.566 |
afr_5 | gfo | RS84_02051 | RS84_01084 | 1,5-anhydro-D-fructose reductase. | Glucose--fructose oxidoreductase precursor. | 0.694 |
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