Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47290.1 | KJL47292.1 | RS84_02080 | RS84_02082 | Bacterial alpha-L-rhamnosidase. | Inosine-uridine preferring nucleoside hydrolase. | 0.836 |
KJL47290.1 | glgC | RS84_02080 | RS84_02829 | Bacterial alpha-L-rhamnosidase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.580 |
KJL47290.1 | lacZ_1 | RS84_02080 | RS84_01993 | Bacterial alpha-L-rhamnosidase. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.518 |
KJL47290.1 | nlhH_4 | RS84_02080 | RS84_02079 | Bacterial alpha-L-rhamnosidase. | Carboxylesterase NlhH. | 0.697 |
KJL47290.1 | nlhH_5 | RS84_02080 | RS84_02081 | Bacterial alpha-L-rhamnosidase. | Carboxylesterase NlhH. | 0.787 |
KJL47290.1 | pkn1 | RS84_02080 | RS84_03011 | Bacterial alpha-L-rhamnosidase. | Serine/threonine-protein kinase pkn1. | 0.671 |
KJL47290.1 | pldh-t | RS84_02080 | RS84_01995 | Bacterial alpha-L-rhamnosidase. | Pyridoxal 4-dehydrogenase. | 0.548 |
KJL47290.1 | qdoI | RS84_02080 | RS84_02078 | Bacterial alpha-L-rhamnosidase. | Quercetin 2,3-dioxygenase. | 0.761 |
KJL47290.1 | rpoA | RS84_02080 | RS84_00514 | Bacterial alpha-L-rhamnosidase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.561 |
KJL47290.1 | rpoZ | RS84_02080 | RS84_02980 | Bacterial alpha-L-rhamnosidase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.559 |
KJL47292.1 | KJL47290.1 | RS84_02082 | RS84_02080 | Inosine-uridine preferring nucleoside hydrolase. | Bacterial alpha-L-rhamnosidase. | 0.836 |
KJL47292.1 | nlhH_4 | RS84_02082 | RS84_02079 | Inosine-uridine preferring nucleoside hydrolase. | Carboxylesterase NlhH. | 0.746 |
KJL47292.1 | nlhH_5 | RS84_02082 | RS84_02081 | Inosine-uridine preferring nucleoside hydrolase. | Carboxylesterase NlhH. | 0.782 |
KJL47292.1 | qdoI | RS84_02082 | RS84_02078 | Inosine-uridine preferring nucleoside hydrolase. | Quercetin 2,3-dioxygenase. | 0.766 |
glgC | KJL47290.1 | RS84_02829 | RS84_02080 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | Bacterial alpha-L-rhamnosidase. | 0.580 |
lacZ_1 | KJL47290.1 | RS84_01993 | RS84_02080 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Bacterial alpha-L-rhamnosidase. | 0.518 |
nlhH_4 | KJL47290.1 | RS84_02079 | RS84_02080 | Carboxylesterase NlhH. | Bacterial alpha-L-rhamnosidase. | 0.697 |
nlhH_4 | KJL47292.1 | RS84_02079 | RS84_02082 | Carboxylesterase NlhH. | Inosine-uridine preferring nucleoside hydrolase. | 0.746 |
nlhH_4 | nlhH_5 | RS84_02079 | RS84_02081 | Carboxylesterase NlhH. | Carboxylesterase NlhH. | 0.882 |
nlhH_4 | qdoI | RS84_02079 | RS84_02078 | Carboxylesterase NlhH. | Quercetin 2,3-dioxygenase. | 0.872 |
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