STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsaM1Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1. (373 aa)    
Predicted Functional Partners:
ophA1
Phthalate dioxygenase reductase.
 
 
 0.986
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
  
 
 0.944
ligB
Protocatechuate 4,5-dioxygenase beta chain.
 
  
 0.913
gcvT_2
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 
  0.776
KJL47323.1
Transcriptional regulator PadR-like family protein.
 
     0.763
pobA
P-hydroxybenzoate hydroxylase.
  
 
 0.705
KJL47314.1
Amidohydrolase.
  
  
  0.669
cypC
Fatty-acid peroxygenase.
  
 
 0.551
ssuA_2
Putative aliphatic sulfonates-binding protein precursor.
 
     0.529
KJL47306.1
Amidohydrolase.
  
  
  0.527
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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