Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47306.1 | ligB | RS84_02096 | RS84_02099 | Amidohydrolase. | Protocatechuate 4,5-dioxygenase beta chain. | 0.822 |
KJL47306.1 | paaE | RS84_02096 | RS84_02497 | Amidohydrolase. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.648 |
KJL47306.1 | pobA | RS84_02096 | RS84_02092 | Amidohydrolase. | P-hydroxybenzoate hydroxylase. | 0.580 |
KJL47306.1 | tsaM1 | RS84_02096 | RS84_02115 | Amidohydrolase. | Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1. | 0.527 |
KJL47314.1 | ligB | RS84_02105 | RS84_02099 | Amidohydrolase. | Protocatechuate 4,5-dioxygenase beta chain. | 0.554 |
KJL47314.1 | ophA1 | RS84_02105 | RS84_02116 | Amidohydrolase. | Phthalate dioxygenase reductase. | 0.507 |
KJL47314.1 | paaE | RS84_02105 | RS84_02497 | Amidohydrolase. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.648 |
KJL47314.1 | pobA | RS84_02105 | RS84_02092 | Amidohydrolase. | P-hydroxybenzoate hydroxylase. | 0.728 |
KJL47314.1 | tsaM1 | RS84_02105 | RS84_02115 | Amidohydrolase. | Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1. | 0.669 |
KJL47323.1 | ophA1 | RS84_02114 | RS84_02116 | Transcriptional regulator PadR-like family protein. | Phthalate dioxygenase reductase. | 0.703 |
KJL47323.1 | ssuA_2 | RS84_02114 | RS84_02113 | Transcriptional regulator PadR-like family protein. | Putative aliphatic sulfonates-binding protein precursor. | 0.669 |
KJL47323.1 | tsaM1 | RS84_02114 | RS84_02115 | Transcriptional regulator PadR-like family protein. | Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1. | 0.763 |
cypC | paaE | RS84_01839 | RS84_02497 | Fatty-acid peroxygenase. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.992 |
cypC | pobA | RS84_01839 | RS84_02092 | Fatty-acid peroxygenase. | P-hydroxybenzoate hydroxylase. | 0.776 |
cypC | tsaM1 | RS84_01839 | RS84_02115 | Fatty-acid peroxygenase. | Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1. | 0.551 |
gcvT_2 | paaE | RS84_03587 | RS84_02497 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.821 |
gcvT_2 | tsaM1 | RS84_03587 | RS84_02115 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1. | 0.776 |
ligB | KJL47306.1 | RS84_02099 | RS84_02096 | Protocatechuate 4,5-dioxygenase beta chain. | Amidohydrolase. | 0.822 |
ligB | KJL47314.1 | RS84_02099 | RS84_02105 | Protocatechuate 4,5-dioxygenase beta chain. | Amidohydrolase. | 0.554 |
ligB | ophA1 | RS84_02099 | RS84_02116 | Protocatechuate 4,5-dioxygenase beta chain. | Phthalate dioxygenase reductase. | 0.484 |
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