STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL47342.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
KJL47340.1
Xylose isomerase-like TIM barrel.
  
   0.999
ntdC
Glucose-6-phosphate 3-dehydrogenase.
  
 
  0.836
KJL47341.1
Hypothetical protein.
       0.782
fruA
PTS system fructose-specific EIIABC component.
  
 
  0.720
KJL47338.1
Hypothetical protein.
      
0.710
KJL47339.1
Xylose isomerase-like TIM barrel.
      0.710
hyi_2
Hydroxypyruvate isomerase; Belongs to the hyi family.
    
  0.572
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
 
 0.539
trpE_2
Anthranilate synthase component 1.
    
  0.524
KJL47345.1
Trehalose utilization.
       0.520
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.