STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
afsQ1Transcriptional regulatory protein AfsQ1. (257 aa)    
Predicted Functional Partners:
rcsC
Sensor histidine kinase RcsC.
  0.946
senX3
Signal-transduction histidine kinase senX3.
 0.928
tcrY_2
Putative sensor histidine kinase TcrY.
 0.919
mtrB
Sensor histidine kinase MtrB.
 0.907
tcrY_1
Putative sensor histidine kinase TcrY.
 
 0.905
arlS
Signal transduction histidine-protein kinase ArlS.
  
  0.887
yycG
Sensor histidine kinase YycG.
 
 0.881
cusS
Sensor kinase CusS.
 
 0.876
czcS
Sensor protein CzcS precursor.
  
  0.842
kdpD
Sensor protein KdpD.
  
 0.790
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.