node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47623.1 | KJL49284.1 | RS84_02421 | RS84_00397 | Putative DNA ligase-like protein. | Putative DNA ligase-like protein. | 0.496 |
KJL47623.1 | KJL49510.1 | RS84_02421 | RS84_00223 | Putative DNA ligase-like protein. | Hypothetical protein. | 0.858 |
KJL47623.1 | dnaN | RS84_02421 | RS84_01792 | Putative DNA ligase-like protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.858 |
KJL47623.1 | lig | RS84_02421 | RS84_02493 | Putative DNA ligase-like protein. | Putative DNA ligase-like protein; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.598 |
KJL47623.1 | ligA | RS84_02421 | RS84_03109 | Putative DNA ligase-like protein. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.755 |
KJL47623.1 | polA_2 | RS84_02421 | RS84_03006 | Putative DNA ligase-like protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.838 |
KJL47623.1 | ykoU | RS84_02421 | RS84_02420 | Putative DNA ligase-like protein. | Putative ATP-dependent DNA ligase YkoU. | 0.985 |
KJL47623.1 | ykoV | RS84_02421 | RS84_00398 | Putative DNA ligase-like protein. | Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.931 |
KJL47623.1 | ypcP | RS84_02421 | RS84_02645 | Putative DNA ligase-like protein. | 5'-3' exonuclease. | 0.887 |
KJL47695.1 | lig | RS84_02494 | RS84_02493 | Bacterial regulatory protein, tetR family. | Putative DNA ligase-like protein; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.590 |
KJL49284.1 | KJL47623.1 | RS84_00397 | RS84_02421 | Putative DNA ligase-like protein. | Putative DNA ligase-like protein. | 0.496 |
KJL49284.1 | KJL49510.1 | RS84_00397 | RS84_00223 | Putative DNA ligase-like protein. | Hypothetical protein. | 0.866 |
KJL49284.1 | dnaN | RS84_00397 | RS84_01792 | Putative DNA ligase-like protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.866 |
KJL49284.1 | lig | RS84_00397 | RS84_02493 | Putative DNA ligase-like protein. | Putative DNA ligase-like protein; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.703 |
KJL49284.1 | ligA | RS84_00397 | RS84_03109 | Putative DNA ligase-like protein. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.855 |
KJL49284.1 | polA_2 | RS84_00397 | RS84_03006 | Putative DNA ligase-like protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.926 |
KJL49284.1 | ykoU | RS84_00397 | RS84_02420 | Putative DNA ligase-like protein. | Putative ATP-dependent DNA ligase YkoU. | 0.878 |
KJL49284.1 | ykoV | RS84_00397 | RS84_00398 | Putative DNA ligase-like protein. | Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.986 |
KJL49284.1 | ypcP | RS84_00397 | RS84_02645 | Putative DNA ligase-like protein. | 5'-3' exonuclease. | 0.805 |
KJL49510.1 | KJL47623.1 | RS84_00223 | RS84_02421 | Hypothetical protein. | Putative DNA ligase-like protein. | 0.858 |