STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL47710.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
eccCb1
ESX-1 secretion system protein EccCb1.
 
 
   0.948
KJL47711.1
Hypothetical protein.
 
     0.934
KJL47708.1
Hypothetical protein.
 
     0.896
KJL47715.1
Hypothetical protein.
 
     0.892
KJL47707.1
Hypothetical protein.
 
   
 0.888
KJL47709.1
FHA domain protein.
 
    0.870
KJL47712.1
Hypothetical protein.
       0.681
eccCa1_1
ESX-1 secretion system protein EccCa1.
 
 
   0.663
KJL47713.1
Hypothetical protein.
       0.658
eccCa1_2
ESX-1 secretion system protein EccCa1.
 
 
   0.629
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.