STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL47713.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
KJL47712.1
Hypothetical protein.
       0.791
KJL47711.1
Hypothetical protein.
       0.779
KJL47710.1
Hypothetical protein.
       0.658
KJL47714.1
Hypothetical protein.
       0.657
KJL47715.1
Hypothetical protein.
       0.636
KJL47707.1
Hypothetical protein.
       0.447
KJL47708.1
Hypothetical protein.
       0.447
KJL47709.1
FHA domain protein.
       0.447
KJL47704.1
Hypothetical protein.
       0.442
eccCb1
ESX-1 secretion system protein EccCb1.
       0.442
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.