Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL45917.1 | KJL45924.1 | RS84_02535 | RS84_02542 | Hypothetical protein. | Hypothetical protein. | 0.498 |
KJL45917.1 | KJL45925.1 | RS84_02535 | RS84_02543 | Hypothetical protein. | Hypothetical protein. | 0.498 |
KJL45917.1 | macB_1 | RS84_02535 | RS84_02544 | Hypothetical protein. | Macrolide export ATP-binding/permease protein MacB. | 0.498 |
KJL45917.1 | macB_2 | RS84_02535 | RS84_02545 | Hypothetical protein. | Macrolide export ATP-binding/permease protein MacB. | 0.442 |
KJL45917.1 | nudF_1 | RS84_02535 | RS84_02540 | Hypothetical protein. | ADP-ribose pyrophosphatase. | 0.737 |
KJL45917.1 | pyrG | RS84_02535 | RS84_02539 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.737 |
KJL45917.1 | tlyA | RS84_02535 | RS84_02536 | Hypothetical protein. | 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA. | 0.773 |
KJL45917.1 | xerD | RS84_02535 | RS84_02541 | Hypothetical protein. | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.737 |
KJL45924.1 | KJL45917.1 | RS84_02542 | RS84_02535 | Hypothetical protein. | Hypothetical protein. | 0.498 |
KJL45924.1 | KJL45925.1 | RS84_02542 | RS84_02543 | Hypothetical protein. | Hypothetical protein. | 0.956 |
KJL45924.1 | KJL46115.1 | RS84_02542 | RS84_02738 | Hypothetical protein. | Hypothetical protein. | 0.554 |
KJL45924.1 | macB_1 | RS84_02542 | RS84_02544 | Hypothetical protein. | Macrolide export ATP-binding/permease protein MacB. | 0.850 |
KJL45924.1 | macB_2 | RS84_02542 | RS84_02545 | Hypothetical protein. | Macrolide export ATP-binding/permease protein MacB. | 0.927 |
KJL45924.1 | nudF_1 | RS84_02542 | RS84_02540 | Hypothetical protein. | ADP-ribose pyrophosphatase. | 0.520 |
KJL45924.1 | pyrG | RS84_02542 | RS84_02539 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.520 |
KJL45924.1 | tlyA | RS84_02542 | RS84_02536 | Hypothetical protein. | 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA. | 0.503 |
KJL45924.1 | xerD | RS84_02542 | RS84_02541 | Hypothetical protein. | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.520 |
KJL45925.1 | KJL45917.1 | RS84_02543 | RS84_02535 | Hypothetical protein. | Hypothetical protein. | 0.498 |
KJL45925.1 | KJL45924.1 | RS84_02543 | RS84_02542 | Hypothetical protein. | Hypothetical protein. | 0.956 |
KJL45925.1 | KJL46115.1 | RS84_02543 | RS84_02738 | Hypothetical protein. | Hypothetical protein. | 0.578 |
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