Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL45932.1 | cmk | RS84_02550 | RS84_02551 | Prephenate dehydrogenase. | Cytidylate kinase. | 0.978 |
KJL45932.1 | der | RS84_02550 | RS84_02552 | Prephenate dehydrogenase. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.876 |
KJL45932.1 | rluB | RS84_02550 | RS84_02549 | Prephenate dehydrogenase. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.839 |
KJL45932.1 | scpA | RS84_02550 | RS84_02547 | Prephenate dehydrogenase. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.838 |
KJL45932.1 | scpB | RS84_02550 | RS84_02548 | Prephenate dehydrogenase. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.838 |
KJL45932.1 | soj_2 | RS84_02550 | RS84_02546 | Prephenate dehydrogenase. | Sporulation initiation inhibitor protein Soj. | 0.838 |
KJL46026.1 | cmk | RS84_02646 | RS84_02551 | 30S ribosomal protein S1 homolog. | Cytidylate kinase. | 0.917 |
KJL46026.1 | ndkA | RS84_02646 | RS84_02697 | 30S ribosomal protein S1 homolog. | Nucleoside diphosphate kinase. | 0.540 |
cmk | KJL45932.1 | RS84_02551 | RS84_02550 | Cytidylate kinase. | Prephenate dehydrogenase. | 0.978 |
cmk | KJL46026.1 | RS84_02551 | RS84_02646 | Cytidylate kinase. | 30S ribosomal protein S1 homolog. | 0.917 |
cmk | der | RS84_02551 | RS84_02552 | Cytidylate kinase. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.999 |
cmk | ndkA | RS84_02551 | RS84_02697 | Cytidylate kinase. | Nucleoside diphosphate kinase. | 0.949 |
cmk | nrdE2 | RS84_02551 | RS84_00210 | Cytidylate kinase. | Ribonucleoside-diphosphate reductase subunit alpha 2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.893 |
cmk | panC | RS84_02551 | RS84_01150 | Cytidylate kinase. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.921 |
cmk | rluB | RS84_02551 | RS84_02549 | Cytidylate kinase. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.994 |
cmk | scpA | RS84_02551 | RS84_02547 | Cytidylate kinase. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.957 |
cmk | scpB | RS84_02551 | RS84_02548 | Cytidylate kinase. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.971 |
cmk | soj_2 | RS84_02551 | RS84_02546 | Cytidylate kinase. | Sporulation initiation inhibitor protein Soj. | 0.837 |
der | KJL45932.1 | RS84_02552 | RS84_02550 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Prephenate dehydrogenase. | 0.876 |
der | cmk | RS84_02552 | RS84_02551 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Cytidylate kinase. | 0.999 |
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