Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46000.1 | KJL46001.1 | RS84_02620 | RS84_02621 | Hypothetical protein. | Hypothetical protein. | 0.953 |
KJL46000.1 | KJL46002.1 | RS84_02620 | RS84_02622 | Hypothetical protein. | Hypothetical protein. | 0.792 |
KJL46000.1 | KJL46003.1 | RS84_02620 | RS84_02623 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.655 |
KJL46000.1 | betI_12 | RS84_02620 | RS84_02619 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.868 |
KJL46001.1 | KJL46000.1 | RS84_02621 | RS84_02620 | Hypothetical protein. | Hypothetical protein. | 0.953 |
KJL46001.1 | KJL46002.1 | RS84_02621 | RS84_02622 | Hypothetical protein. | Hypothetical protein. | 0.780 |
KJL46001.1 | KJL46003.1 | RS84_02621 | RS84_02623 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.655 |
KJL46001.1 | betI_12 | RS84_02621 | RS84_02619 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.835 |
KJL46002.1 | KJL46000.1 | RS84_02622 | RS84_02620 | Hypothetical protein. | Hypothetical protein. | 0.792 |
KJL46002.1 | KJL46001.1 | RS84_02622 | RS84_02621 | Hypothetical protein. | Hypothetical protein. | 0.780 |
KJL46002.1 | KJL46003.1 | RS84_02622 | RS84_02623 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.655 |
KJL46002.1 | betI_12 | RS84_02622 | RS84_02619 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.545 |
KJL46003.1 | KJL46000.1 | RS84_02623 | RS84_02620 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.655 |
KJL46003.1 | KJL46001.1 | RS84_02623 | RS84_02621 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.655 |
KJL46003.1 | KJL46002.1 | RS84_02623 | RS84_02622 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.655 |
KJL46003.1 | betI_12 | RS84_02623 | RS84_02619 | Acetyltransferase (GNAT) family protein. | HTH-type transcriptional regulator BetI. | 0.468 |
KJL47490.1 | KJL49021.1 | RS84_02284 | RS84_00651 | Hypothetical protein. | PspC domain protein. | 0.447 |
KJL47490.1 | betI_12 | RS84_02284 | RS84_02619 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.408 |
KJL47490.1 | ykoD_3 | RS84_02284 | RS84_02283 | Hypothetical protein. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.942 |
KJL49021.1 | KJL47490.1 | RS84_00651 | RS84_02284 | PspC domain protein. | Hypothetical protein. | 0.447 |
page 1 of 2