Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46831.1 | aioB | RS84_03473 | RS84_02640 | Hypothetical protein. | Arsenite oxidase subunit AioB precursor. | 0.863 |
KJL46831.1 | ctaC | RS84_03473 | RS84_02634 | Hypothetical protein. | Cytochrome c oxidase subunit 2 precursor. | 0.976 |
KJL46831.1 | ctaD | RS84_03473 | RS84_02635 | Hypothetical protein. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.976 |
KJL46831.1 | ctaE | RS84_03473 | RS84_02642 | Hypothetical protein. | Cytochrome c oxidase subunit 3. | 0.937 |
KJL46831.1 | ctaF | RS84_03473 | RS84_02636 | Hypothetical protein. | Cytochrome c oxidase polypeptide 4. | 0.937 |
KJL46831.1 | petB | RS84_03473 | RS84_02639 | Hypothetical protein. | Cytochrome b6. | 0.976 |
KJL46831.1 | petC1 | RS84_03473 | RS84_01302 | Hypothetical protein. | Cytochrome b6-f complex iron-sulfur subunit 1. | 0.863 |
KJL46831.1 | qcrC | RS84_03473 | RS84_02641 | Hypothetical protein. | Menaquinol-cytochrome c reductase cytochrome c subunit. | 0.937 |
aioB | KJL46831.1 | RS84_02640 | RS84_03473 | Arsenite oxidase subunit AioB precursor. | Hypothetical protein. | 0.863 |
aioB | atpB | RS84_02640 | RS84_03386 | Arsenite oxidase subunit AioB precursor. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.621 |
aioB | ctaB | RS84_02640 | RS84_02800 | Arsenite oxidase subunit AioB precursor. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.666 |
aioB | ctaC | RS84_02640 | RS84_02634 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase subunit 2 precursor. | 0.999 |
aioB | ctaD | RS84_02640 | RS84_02635 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
aioB | ctaE | RS84_02640 | RS84_02642 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase subunit 3. | 0.999 |
aioB | ctaF | RS84_02640 | RS84_02636 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase polypeptide 4. | 0.999 |
aioB | petB | RS84_02640 | RS84_02639 | Arsenite oxidase subunit AioB precursor. | Cytochrome b6. | 0.999 |
aioB | qcrC | RS84_02640 | RS84_02641 | Arsenite oxidase subunit AioB precursor. | Menaquinol-cytochrome c reductase cytochrome c subunit. | 0.999 |
atpB | aioB | RS84_03386 | RS84_02640 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Arsenite oxidase subunit AioB precursor. | 0.621 |
atpB | ctaC | RS84_03386 | RS84_02634 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c oxidase subunit 2 precursor. | 0.938 |
atpB | ctaD | RS84_03386 | RS84_02635 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.920 |
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