Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL45932.1 | KJL46234.1 | RS84_02550 | RS84_02861 | Prephenate dehydrogenase. | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | 0.421 |
KJL45932.1 | apt | RS84_02550 | RS84_01260 | Prephenate dehydrogenase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.815 |
KJL45932.1 | pyrE_2 | RS84_02550 | RS84_03475 | Prephenate dehydrogenase. | Orotate phosphoribosyltransferase. | 0.853 |
KJL46234.1 | KJL45932.1 | RS84_02861 | RS84_02550 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Prephenate dehydrogenase. | 0.421 |
KJL46234.1 | KJL46235.1 | RS84_02861 | RS84_02862 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.798 |
KJL46234.1 | KJL46236.1 | RS84_02861 | RS84_02863 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Helix-turn-helix domain protein. | 0.608 |
KJL46234.1 | KJL46237.1 | RS84_02861 | RS84_02864 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.510 |
KJL46234.1 | KJL46238.1 | RS84_02861 | RS84_02865 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.478 |
KJL46234.1 | apt | RS84_02861 | RS84_01260 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.511 |
KJL46234.1 | pta | RS84_02861 | RS84_00073 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.711 |
KJL46234.1 | pyrE_2 | RS84_02861 | RS84_03475 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Orotate phosphoribosyltransferase. | 0.539 |
KJL46234.1 | whiA | RS84_02861 | RS84_02662 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Putative sporulation transcription regulator WhiA; Involved in cell division and chromosome segregation. | 0.400 |
KJL46235.1 | KJL46234.1 | RS84_02862 | RS84_02861 | Hypothetical protein. | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | 0.798 |
KJL46235.1 | KJL46236.1 | RS84_02862 | RS84_02863 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.512 |
KJL46235.1 | KJL46237.1 | RS84_02862 | RS84_02864 | Hypothetical protein. | Hypothetical protein. | 0.510 |
KJL46235.1 | KJL46238.1 | RS84_02862 | RS84_02865 | Hypothetical protein. | Hypothetical protein. | 0.478 |
KJL46236.1 | KJL46234.1 | RS84_02863 | RS84_02861 | Helix-turn-helix domain protein. | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | 0.608 |
KJL46236.1 | KJL46235.1 | RS84_02863 | RS84_02862 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.512 |
KJL46236.1 | KJL46237.1 | RS84_02863 | RS84_02864 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.773 |
KJL46236.1 | KJL46238.1 | RS84_02863 | RS84_02865 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.718 |
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