STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL46254.1RDD family protein. (132 aa)    
Predicted Functional Partners:
glnA_2
Glutamine synthetase.
  
   0.691
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
  
     0.617
ccs1
Cytochrome c biogenesis protein Ccs1.
  
     0.604
KJL47987.1
Cytochrome c oxidase caa3 assembly factor (Caa3-CtaG).
  
     0.547
aioB
Arsenite oxidase subunit AioB precursor.
  
     0.509
ctaF
Cytochrome c oxidase polypeptide 4.
  
     0.463
KJL49482.1
Hypothetical protein.
  
     0.446
KJL48880.1
MaoC like domain protein; Belongs to the UPF0336 family.
  
    0.445
KJL46541.1
Hypothetical protein.
  
     0.436
KJL47609.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.