Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
alaA | ald | RS84_03468 | RS84_00502 | Glutamate-pyruvate aminotransferase AlaA. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.876 |
alaA | alr_1 | RS84_03468 | RS84_01194 | Glutamate-pyruvate aminotransferase AlaA. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.794 |
alaA | alr_2 | RS84_03468 | RS84_02364 | Glutamate-pyruvate aminotransferase AlaA. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.868 |
alaA | alr_3 | RS84_03468 | RS84_02893 | Glutamate-pyruvate aminotransferase AlaA. | Alanine racemase. | 0.838 |
alaA | alr_4 | RS84_03468 | RS84_02894 | Glutamate-pyruvate aminotransferase AlaA. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.877 |
ald | alaA | RS84_00502 | RS84_03468 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Glutamate-pyruvate aminotransferase AlaA. | 0.876 |
ald | alr_1 | RS84_00502 | RS84_01194 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.945 |
ald | alr_2 | RS84_00502 | RS84_02364 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.957 |
ald | alr_3 | RS84_00502 | RS84_02893 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Alanine racemase. | 0.957 |
ald | alr_4 | RS84_00502 | RS84_02894 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.963 |
alr_1 | alaA | RS84_01194 | RS84_03468 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Glutamate-pyruvate aminotransferase AlaA. | 0.794 |
alr_1 | ald | RS84_01194 | RS84_00502 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.945 |
alr_1 | alr_2 | RS84_01194 | RS84_02364 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.510 |
alr_1 | alr_3 | RS84_01194 | RS84_02893 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Alanine racemase. | 0.568 |
alr_1 | alr_4 | RS84_01194 | RS84_02894 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.828 |
alr_1 | ddlA | RS84_01194 | RS84_03179 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.951 |
alr_1 | vanA | RS84_01194 | RS84_01195 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Vancomycin/teicoplanin A-type resistance protein VanA; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.991 |
alr_2 | alaA | RS84_02364 | RS84_03468 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Glutamate-pyruvate aminotransferase AlaA. | 0.868 |
alr_2 | ald | RS84_02364 | RS84_00502 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.957 |
alr_2 | alr_1 | RS84_02364 | RS84_01194 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.510 |
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