STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL46296.1Hypothetical protein. (789 aa)    
Predicted Functional Partners:
swrC
Swarming motility protein SwrC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.953
mdtA
Multidrug resistance protein MdtA.
 
 0.951
KJL49198.1
Hypothetical protein.
  
 0.933
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.778
KJL48615.1
Hypothetical protein.
  
  
  0.759
macB_2
Macrolide export ATP-binding/permease protein MacB.
  
 
 0.731
KJL47607.1
Hypothetical protein; ADP-specific Phosphofructokinase/Glucokinase conserved region.
  
     0.695
KJL46620.1
Hypothetical protein.
  
     0.650
KJL49144.1
Hypothetical protein.
    
 
 0.634
KJL47131.1
Fibronectin type III domain protein.
    
 
 0.634
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.