Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46344.1 | KJL46347.1 | RS84_02975 | RS84_02978 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.957 |
KJL46344.1 | carA | RS84_02975 | RS84_02976 | Hypothetical protein. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.948 |
KJL46344.1 | carB | RS84_02975 | RS84_02977 | Hypothetical protein. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.997 |
KJL46344.1 | pyrB | RS84_02975 | RS84_02973 | Hypothetical protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.971 |
KJL46344.1 | pyrC | RS84_02975 | RS84_02974 | Hypothetical protein. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.951 |
KJL46344.1 | pyrD | RS84_02975 | RS84_02630 | Hypothetical protein. | Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.793 |
KJL46344.1 | pyrE_1 | RS84_02975 | RS84_01428 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.760 |
KJL46344.1 | pyrR | RS84_02975 | RS84_02972 | Hypothetical protein. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.950 |
KJL46347.1 | KJL46344.1 | RS84_02978 | RS84_02975 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Hypothetical protein. | 0.957 |
KJL46347.1 | carA | RS84_02978 | RS84_02976 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.991 |
KJL46347.1 | carB | RS84_02978 | RS84_02977 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.997 |
KJL46347.1 | pyrB | RS84_02978 | RS84_02973 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.994 |
KJL46347.1 | pyrC | RS84_02978 | RS84_02974 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.972 |
KJL46347.1 | pyrD | RS84_02978 | RS84_02630 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.983 |
KJL46347.1 | pyrE_1 | RS84_02978 | RS84_01428 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.998 |
KJL46347.1 | pyrH | RS84_02978 | RS84_03123 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.961 |
KJL46347.1 | pyrR | RS84_02978 | RS84_02972 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.996 |
KJL46347.1 | upp | RS84_02978 | RS84_02241 | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.961 |
carA | KJL46344.1 | RS84_02976 | RS84_02975 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Hypothetical protein. | 0.948 |
carA | KJL46347.1 | RS84_02976 | RS84_02978 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.991 |
page 1 of 5