Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46375.1 | KJL46378.1 | RS84_03007 | RS84_03010 | Hypothetical protein. | GDSL-like Lipase/Acylhydrolase. | 0.588 |
KJL46375.1 | entH | RS84_03007 | RS84_03005 | Hypothetical protein. | Proofreading thioesterase EntH. | 0.497 |
KJL46375.1 | polA_2 | RS84_03007 | RS84_03006 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.684 |
KJL46378.1 | KJL46375.1 | RS84_03010 | RS84_03007 | GDSL-like Lipase/Acylhydrolase. | Hypothetical protein. | 0.588 |
KJL46378.1 | entH | RS84_03010 | RS84_03005 | GDSL-like Lipase/Acylhydrolase. | Proofreading thioesterase EntH. | 0.414 |
dhbC | entH | RS84_00572 | RS84_03005 | Isochorismate synthase DhbC. | Proofreading thioesterase EntH. | 0.534 |
dhbC | menA | RS84_00572 | RS84_00612 | Isochorismate synthase DhbC. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.541 |
dhbC | menB | RS84_00572 | RS84_02288 | Isochorismate synthase DhbC. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.851 |
dhbC | menD | RS84_00572 | RS84_00574 | Isochorismate synthase DhbC. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.985 |
entH | KJL46375.1 | RS84_03005 | RS84_03007 | Proofreading thioesterase EntH. | Hypothetical protein. | 0.497 |
entH | KJL46378.1 | RS84_03005 | RS84_03010 | Proofreading thioesterase EntH. | GDSL-like Lipase/Acylhydrolase. | 0.414 |
entH | dhbC | RS84_03005 | RS84_00572 | Proofreading thioesterase EntH. | Isochorismate synthase DhbC. | 0.534 |
entH | fadB_2 | RS84_03005 | RS84_02909 | Proofreading thioesterase EntH. | Fatty acid oxidation complex subunit alpha. | 0.474 |
entH | fcbB2 | RS84_03005 | RS84_02318 | Proofreading thioesterase EntH. | 4-chlorobenzoyl coenzyme A dehalogenase-2. | 0.441 |
entH | menA | RS84_03005 | RS84_00612 | Proofreading thioesterase EntH. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.933 |
entH | menB | RS84_03005 | RS84_02288 | Proofreading thioesterase EntH. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.954 |
entH | menD | RS84_03005 | RS84_00574 | Proofreading thioesterase EntH. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.612 |
entH | paaE | RS84_03005 | RS84_02497 | Proofreading thioesterase EntH. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.703 |
entH | polA_2 | RS84_03005 | RS84_03006 | Proofreading thioesterase EntH. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.673 |
fadB_2 | entH | RS84_02909 | RS84_03005 | Fatty acid oxidation complex subunit alpha. | Proofreading thioesterase EntH. | 0.474 |
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