STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL46423.1Methylmalonyl-CoA carboxyltransferase 12S subunit. (517 aa)    
Predicted Functional Partners:
accA1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 0.997
accC
Biotin carboxylase.
 
 0.987
mmgC_3
Acyl-CoA dehydrogenase.
 
 
 0.946
mmgC_1
Acyl-CoA dehydrogenase.
  
 
 0.925
echA8_2
Putative enoyl-CoA hydratase echA8.
 
 
 0.910
citE
Citrate lyase subunit beta-like protein; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.882
fadB_2
Fatty acid oxidation complex subunit alpha.
  
 
 0.835
paaZ_2
Bifunctional protein PaaZ.
 
 
 0.789
fadE
Putative acyl-CoA dehydrogenase.
   
 
 0.782
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.780
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.