Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46471.1 | acyP | RS84_03107 | RS84_03108 | Acetyltransferase (GNAT) family protein. | Acylphosphatase. | 0.773 |
KJL46471.1 | deaD_2 | RS84_03107 | RS84_03106 | Acetyltransferase (GNAT) family protein. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.656 |
KJL46471.1 | fadD | RS84_03107 | RS84_03105 | Acetyltransferase (GNAT) family protein. | Long-chain-fatty-acid--CoA ligase. | 0.500 |
KJL46891.1 | acyP | RS84_03533 | RS84_03108 | 2-oxoglutaramate amidase. | Acylphosphatase. | 0.514 |
KJL46891.1 | pta | RS84_03533 | RS84_00073 | 2-oxoglutaramate amidase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.444 |
ackA | acyP | RS84_00074 | RS84_03108 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Acylphosphatase. | 0.885 |
ackA | paaZ_1 | RS84_00074 | RS84_02519 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Bifunctional protein PaaZ. | 0.759 |
ackA | pta | RS84_00074 | RS84_00073 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.999 |
acyP | KJL46471.1 | RS84_03108 | RS84_03107 | Acylphosphatase. | Acetyltransferase (GNAT) family protein. | 0.773 |
acyP | KJL46891.1 | RS84_03108 | RS84_03533 | Acylphosphatase. | 2-oxoglutaramate amidase. | 0.514 |
acyP | ackA | RS84_03108 | RS84_00074 | Acylphosphatase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.885 |
acyP | atzE | RS84_03108 | RS84_00688 | Acylphosphatase. | Biuret hydrolase. | 0.878 |
acyP | deaD_2 | RS84_03108 | RS84_03106 | Acylphosphatase. | ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.663 |
acyP | fadD | RS84_03108 | RS84_03105 | Acylphosphatase. | Long-chain-fatty-acid--CoA ligase. | 0.531 |
acyP | gatA_1 | RS84_03108 | RS84_01794 | Acylphosphatase. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 0.837 |
acyP | gatA_2 | RS84_03108 | RS84_03103 | Acylphosphatase. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.797 |
acyP | paaZ_1 | RS84_03108 | RS84_02519 | Acylphosphatase. | Bifunctional protein PaaZ. | 0.613 |
acyP | pta | RS84_03108 | RS84_00073 | Acylphosphatase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.899 |
atzE | acyP | RS84_00688 | RS84_03108 | Biuret hydrolase. | Acylphosphatase. | 0.878 |
atzE | gatA_1 | RS84_00688 | RS84_01794 | Biuret hydrolase. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 0.709 |
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