Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46552.1 | KJL46553.1 | RS84_03188 | RS84_03189 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL46552.1 | KJL46555.1 | RS84_03188 | RS84_03191 | Hypothetical protein. | Hypothetical protein. | 0.588 |
KJL46552.1 | KJL46556.1 | RS84_03188 | RS84_03192 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.421 |
KJL46552.1 | alx | RS84_03188 | RS84_03187 | Hypothetical protein. | Inner membrane protein alx. | 0.548 |
KJL46552.1 | entS_3 | RS84_03188 | RS84_03193 | Hypothetical protein. | Enterobactin exporter EntS. | 0.421 |
KJL46552.1 | sigE | RS84_03188 | RS84_03190 | Hypothetical protein. | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.588 |
KJL46553.1 | KJL46552.1 | RS84_03189 | RS84_03188 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL46553.1 | KJL46555.1 | RS84_03189 | RS84_03191 | Hypothetical protein. | Hypothetical protein. | 0.588 |
KJL46553.1 | KJL46556.1 | RS84_03189 | RS84_03192 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.421 |
KJL46553.1 | alx | RS84_03189 | RS84_03187 | Hypothetical protein. | Inner membrane protein alx. | 0.623 |
KJL46553.1 | entS_3 | RS84_03189 | RS84_03193 | Hypothetical protein. | Enterobactin exporter EntS. | 0.421 |
KJL46553.1 | sigE | RS84_03189 | RS84_03190 | Hypothetical protein. | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.588 |
KJL46555.1 | KJL46552.1 | RS84_03191 | RS84_03188 | Hypothetical protein. | Hypothetical protein. | 0.588 |
KJL46555.1 | KJL46553.1 | RS84_03191 | RS84_03189 | Hypothetical protein. | Hypothetical protein. | 0.588 |
KJL46555.1 | KJL46556.1 | RS84_03191 | RS84_03192 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.539 |
KJL46555.1 | alx | RS84_03191 | RS84_03187 | Hypothetical protein. | Inner membrane protein alx. | 0.428 |
KJL46555.1 | entS_3 | RS84_03191 | RS84_03193 | Hypothetical protein. | Enterobactin exporter EntS. | 0.539 |
KJL46555.1 | sigE | RS84_03191 | RS84_03190 | Hypothetical protein. | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.894 |
KJL46556.1 | KJL46552.1 | RS84_03192 | RS84_03188 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.421 |
KJL46556.1 | KJL46553.1 | RS84_03192 | RS84_03189 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.421 |
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