STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clgR_2Transcriptional regulator ClgR. (102 aa)    
Predicted Functional Partners:
KJL46637.1
Hypothetical protein.
 
     0.827
rbpA_2
RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
    0.648
KJL46129.1
Hypothetical protein.
  
     0.644
KJL46274.1
Hypothetical protein.
  
     0.643
KJL48527.1
Hypothetical protein.
  
     0.615
cinA_2
Putative competence-damage inducible protein; Belongs to the CinA family.
    
 0.607
KJL46285.1
Hypothetical protein.
  
     0.602
pgsA2
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.602
KJL45995.1
YGGT family protein.
  
     0.575
KJL46213.1
Hypothetical protein.
  
     0.562
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.