STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL46703.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
KJL46702.1
Hypothetical protein.
 
     0.881
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.839
ribF
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
       0.736
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.724
KJL46705.1
Hypothetical protein.
       0.686
KJL46992.1
Hypothetical protein.
  
     0.624
KJL46814.1
Hypothetical protein.
  
     0.609
KJL46277.1
Hypothetical protein.
  
     0.587
mutY
A/G-specific adenine glycosylase.
       0.556
yneA
Cell division suppressor protein YneA.
  
     0.514
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.