Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46715.1 | KJL46717.1 | RS84_03355 | RS84_03357 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.553 |
KJL46715.1 | KJL46719.1 | RS84_03355 | RS84_03359 | Hypothetical protein. | Hypothetical protein. | 0.538 |
KJL46715.1 | nudC_1 | RS84_03355 | RS84_03358 | Hypothetical protein. | NADH pyrophosphatase. | 0.546 |
KJL46715.1 | rnr | RS84_03355 | RS84_03356 | Hypothetical protein. | Ribonuclease R. | 0.553 |
KJL46717.1 | KJL46715.1 | RS84_03357 | RS84_03355 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.553 |
KJL46717.1 | KJL46719.1 | RS84_03357 | RS84_03359 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.751 |
KJL46717.1 | gabT | RS84_03357 | RS84_00492 | Phosphotransferase enzyme family protein. | 4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.459 |
KJL46717.1 | nudC_1 | RS84_03357 | RS84_03358 | Phosphotransferase enzyme family protein. | NADH pyrophosphatase. | 0.791 |
KJL46717.1 | rnr | RS84_03357 | RS84_03356 | Phosphotransferase enzyme family protein. | Ribonuclease R. | 0.773 |
KJL46717.1 | tagD_2 | RS84_03357 | RS84_01902 | Phosphotransferase enzyme family protein. | Glycerol-3-phosphate cytidylyltransferase. | 0.532 |
KJL46717.1 | thiD | RS84_03357 | RS84_00447 | Phosphotransferase enzyme family protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.916 |
KJL46717.1 | thiL | RS84_03357 | RS84_03176 | Phosphotransferase enzyme family protein. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.481 |
KJL46719.1 | KJL46715.1 | RS84_03359 | RS84_03355 | Hypothetical protein. | Hypothetical protein. | 0.538 |
KJL46719.1 | KJL46717.1 | RS84_03359 | RS84_03357 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.751 |
KJL46719.1 | nudC_1 | RS84_03359 | RS84_03358 | Hypothetical protein. | NADH pyrophosphatase. | 0.762 |
KJL46719.1 | rnr | RS84_03359 | RS84_03356 | Hypothetical protein. | Ribonuclease R. | 0.751 |
gabT | KJL46717.1 | RS84_00492 | RS84_03357 | 4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Phosphotransferase enzyme family protein. | 0.459 |
nudC_1 | KJL46715.1 | RS84_03358 | RS84_03355 | NADH pyrophosphatase. | Hypothetical protein. | 0.546 |
nudC_1 | KJL46717.1 | RS84_03358 | RS84_03357 | NADH pyrophosphatase. | Phosphotransferase enzyme family protein. | 0.791 |
nudC_1 | KJL46719.1 | RS84_03358 | RS84_03359 | NADH pyrophosphatase. | Hypothetical protein. | 0.762 |
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