STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL46762.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
argS
Arginine--tRNA ligase.
       0.762
KJL48926.1
Hypothetical protein.
  
     0.747
KJL46086.1
Hypothetical protein.
  
     0.739
KJL48191.1
Hypothetical protein.
  
     0.708
KJL46778.1
Hypothetical protein.
  
     0.674
KJL46848.1
Hypothetical protein.
  
     0.671
KJL49029.1
Hypothetical protein.
  
     0.665
KJL48021.1
Hypothetical protein.
  
     0.661
KJL46992.1
Hypothetical protein.
  
     0.659
KJL47732.1
Hypothetical protein.
  
     0.647
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.