STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL46781.1Carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (158 aa)    
Predicted Functional Partners:
iphP_2
Tyrosine-protein phosphatase precursor.
       0.773
KJL46779.1
Siderophore-interacting protein.
       0.664
sigJ_3
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.623
sigJ_1
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.606
sigJ_2
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.597
fac-dex_2
Fluoroacetate dehalogenase.
  
 
  0.542
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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