STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL46954.1Putative multidrug export ATP-binding/permease protein. (678 aa)    
Predicted Functional Partners:
glnQ_1
Glutamine transport ATP-binding protein GlnQ.
 
     
0.866
oppF_1
Oligopeptide transport ATP-binding protein OppF.
 
     
0.810
oppF_7
Oligopeptide transport ATP-binding protein OppF.
 
   
 
0.658
spoVK
Stage V sporulation protein K.
    
 0.632
moeZ_1
Putative adenylyltransferase/sulfurtransferase MoeZ.
   
  0.595
moeZ_2
Putative adenylyltransferase/sulfurtransferase MoeZ.
   
  0.595
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.594
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 
 0.563
phrB
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
    
   0.557
KJL45961.1
Alpha-pyrone synthesis polyketide synthase-like Pks18.
    
   0.539
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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