Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47051.1 | afr_5 | RS84_03698 | RS84_02051 | Trehalose utilization. | 1,5-anhydro-D-fructose reductase. | 0.658 |
KJL47051.1 | afr_7 | RS84_03698 | RS84_03699 | Trehalose utilization. | 1,5-anhydro-D-fructose reductase. | 0.944 |
KJL47051.1 | amy | RS84_03698 | RS84_00917 | Trehalose utilization. | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.570 |
KJL47051.1 | bga_2 | RS84_03698 | RS84_03696 | Trehalose utilization. | Beta-galactosidase precursor. | 0.473 |
KJL47051.1 | iolE_2 | RS84_03698 | RS84_02050 | Trehalose utilization. | Inosose dehydratase. | 0.434 |
KJL47051.1 | purR | RS84_03698 | RS84_03700 | Trehalose utilization. | HTH-type transcriptional repressor PurR. | 0.623 |
KJL47051.1 | ydgJ | RS84_03698 | RS84_01982 | Trehalose utilization. | Putative oxidoreductase YdgJ. | 0.420 |
KJL47051.1 | yhjE_3 | RS84_03698 | RS84_03697 | Trehalose utilization. | Inner membrane metabolite transport protein YhjE. | 0.547 |
afr_5 | KJL47051.1 | RS84_02051 | RS84_03698 | 1,5-anhydro-D-fructose reductase. | Trehalose utilization. | 0.658 |
afr_5 | iolE_2 | RS84_02051 | RS84_02050 | 1,5-anhydro-D-fructose reductase. | Inosose dehydratase. | 0.959 |
afr_7 | KJL47051.1 | RS84_03699 | RS84_03698 | 1,5-anhydro-D-fructose reductase. | Trehalose utilization. | 0.944 |
afr_7 | bga_2 | RS84_03699 | RS84_03696 | 1,5-anhydro-D-fructose reductase. | Beta-galactosidase precursor. | 0.440 |
afr_7 | iolE_2 | RS84_03699 | RS84_02050 | 1,5-anhydro-D-fructose reductase. | Inosose dehydratase. | 0.766 |
afr_7 | purR | RS84_03699 | RS84_03700 | 1,5-anhydro-D-fructose reductase. | HTH-type transcriptional repressor PurR. | 0.623 |
afr_7 | ydgJ | RS84_03699 | RS84_01982 | 1,5-anhydro-D-fructose reductase. | Putative oxidoreductase YdgJ. | 0.405 |
afr_7 | yhjE_3 | RS84_03699 | RS84_03697 | 1,5-anhydro-D-fructose reductase. | Inner membrane metabolite transport protein YhjE. | 0.547 |
amy | KJL47051.1 | RS84_00917 | RS84_03698 | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | Trehalose utilization. | 0.570 |
amy | bga_2 | RS84_00917 | RS84_03696 | Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. | Beta-galactosidase precursor. | 0.477 |
bga_2 | KJL47051.1 | RS84_03696 | RS84_03698 | Beta-galactosidase precursor. | Trehalose utilization. | 0.473 |
bga_2 | afr_7 | RS84_03696 | RS84_03699 | Beta-galactosidase precursor. | 1,5-anhydro-D-fructose reductase. | 0.440 |
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