Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47068.1 | bdcA | RS84_03716 | RS84_03715 | Hypothetical protein. | Cyclic-di-GMP-binding biofilm dispersal mediator protein. | 0.697 |
KJL47068.1 | betI_14 | RS84_03716 | RS84_03717 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.545 |
KJL47068.1 | gap_2 | RS84_03716 | RS84_03714 | Hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.429 |
KJL47070.1 | betI_14 | RS84_03718 | RS84_03717 | Histamine oxidase. | HTH-type transcriptional regulator BetI. | 0.427 |
KJL47662.1 | betI_14 | RS84_02460 | RS84_03717 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.410 |
KJL47696.1 | betI_14 | RS84_02495 | RS84_03717 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.469 |
bdcA | KJL47068.1 | RS84_03715 | RS84_03716 | Cyclic-di-GMP-binding biofilm dispersal mediator protein. | Hypothetical protein. | 0.697 |
bdcA | betI_14 | RS84_03715 | RS84_03717 | Cyclic-di-GMP-binding biofilm dispersal mediator protein. | HTH-type transcriptional regulator BetI. | 0.496 |
bdcA | gap_2 | RS84_03715 | RS84_03714 | Cyclic-di-GMP-binding biofilm dispersal mediator protein. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.657 |
betI_14 | KJL47068.1 | RS84_03717 | RS84_03716 | HTH-type transcriptional regulator BetI. | Hypothetical protein. | 0.545 |
betI_14 | KJL47070.1 | RS84_03717 | RS84_03718 | HTH-type transcriptional regulator BetI. | Histamine oxidase. | 0.427 |
betI_14 | KJL47662.1 | RS84_03717 | RS84_02460 | HTH-type transcriptional regulator BetI. | Hypothetical protein. | 0.410 |
betI_14 | KJL47696.1 | RS84_03717 | RS84_02495 | HTH-type transcriptional regulator BetI. | Hypothetical protein. | 0.469 |
betI_14 | bdcA | RS84_03717 | RS84_03715 | HTH-type transcriptional regulator BetI. | Cyclic-di-GMP-binding biofilm dispersal mediator protein. | 0.496 |
betI_14 | gap_2 | RS84_03717 | RS84_03714 | HTH-type transcriptional regulator BetI. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.425 |
gap_2 | KJL47068.1 | RS84_03714 | RS84_03716 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.429 |
gap_2 | bdcA | RS84_03714 | RS84_03715 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Cyclic-di-GMP-binding biofilm dispersal mediator protein. | 0.657 |
gap_2 | betI_14 | RS84_03714 | RS84_03717 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | HTH-type transcriptional regulator BetI. | 0.425 |