STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD06491.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SDD06539.1
Bacteriophage Gp15 protein.
       0.783
SDD06445.1
Hypothetical protein.
       0.734
SDD06215.1
Hypothetical protein.
       0.723
SDD06256.1
Hypothetical protein.
       0.723
SDD06312.1
Minor capsid protein.
       0.723
SDD06356.1
Minor capsid protein.
       0.723
SDD06398.1
Bacteriophage minor capsid protein.
       0.723
SDD06627.1
Phage-related protein.
       0.722
SDD06175.1
Hypothetical protein.
       0.712
SDD06663.1
Phage minor structural protein, N-terminal region.
       0.711
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.