STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD06627.1Phage-related protein. (248 aa)    
Predicted Functional Partners:
SDD06663.1
Phage minor structural protein, N-terminal region.
  
   0.938
SDD06580.1
Phage tail tape measure protein, TP901 family, core region.
       0.773
SDD06708.1
Protein of unknown function.
       0.773
SDD06539.1
Bacteriophage Gp15 protein.
  
    0.750
SDD06445.1
Hypothetical protein.
  
    0.742
SDD06770.1
Hypothetical protein.
       0.732
SDD06491.1
Hypothetical protein.
       0.722
SDD64219.1
Surface protein repeat SSSPR-51.
  
   0.717
SDD06215.1
Hypothetical protein.
       0.664
SDD06256.1
Hypothetical protein.
       0.664
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.