STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD28842.1Respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor. (203 aa)    
Predicted Functional Partners:
SDD28897.1
Respiratory nitrite reductase (cytochrome ammonia-forming) precursor; Belongs to the cytochrome c-552 family.
 
 0.998
SDD96353.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.865
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.862
SDD28991.1
ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
  
 0.813
SDD28944.1
Cytochrome c biogenesis protein.
  
    0.783
SDD71863.1
Nitrate reductase gamma subunit.
     
 0.734
SDD71959.1
Putative sulfite reductase-associated electron transfer protein DsrO.
 
 
 0.671
SDE09415.1
4Fe-4S binding domain-containing protein.
  
 
 0.525
SDD12288.1
Nitrate reductase gamma subunit.
  
  
 0.501
SDD28792.1
Hypothetical protein.
       0.487
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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