Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDD13415.1 | SDD29177.1 | SAMN04489866_101267 | SAMN04489866_102165 | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.929 |
| SDD29130.1 | SDD29177.1 | SAMN04489866_102164 | SAMN04489866_102165 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.773 |
| SDD29177.1 | SDD13415.1 | SAMN04489866_102165 | SAMN04489866_101267 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | 0.929 |
| SDD29177.1 | SDD29130.1 | SAMN04489866_102165 | SAMN04489866_102164 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.773 |
| SDD29177.1 | SDD74584.1 | SAMN04489866_102165 | SAMN04489866_10684 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | hypoxanthine-DNA glycosylase. | 0.789 |
| SDD29177.1 | SDD79741.1 | SAMN04489866_102165 | SAMN04489866_10738 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | single-stranded-DNA-specific exonuclease. | 0.446 |
| SDD29177.1 | SDD89001.1 | SAMN04489866_102165 | SAMN04489866_10963 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease-3. | 0.915 |
| SDD29177.1 | SDD96019.1 | SAMN04489866_102165 | SAMN04489866_11139 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.601 |
| SDD29177.1 | dinB | SAMN04489866_102165 | SAMN04489866_11340 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.531 |
| SDD29177.1 | msrA | SAMN04489866_102165 | SAMN04489866_10551 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.595 |
| SDD29177.1 | nth | SAMN04489866_102165 | SAMN04489866_11240 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.646 |
| SDD29177.1 | polA | SAMN04489866_102165 | SAMN04489866_11016 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.498 |
| SDD74584.1 | SDD29177.1 | SAMN04489866_10684 | SAMN04489866_102165 | hypoxanthine-DNA glycosylase. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.789 |
| SDD74584.1 | SDD89001.1 | SAMN04489866_10684 | SAMN04489866_10963 | hypoxanthine-DNA glycosylase. | Exodeoxyribonuclease-3. | 0.781 |
| SDD79741.1 | SDD29177.1 | SAMN04489866_10738 | SAMN04489866_102165 | single-stranded-DNA-specific exonuclease. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.446 |
| SDD79741.1 | SDD89001.1 | SAMN04489866_10738 | SAMN04489866_10963 | single-stranded-DNA-specific exonuclease. | Exodeoxyribonuclease-3. | 0.447 |
| SDD79741.1 | SDD96019.1 | SAMN04489866_10738 | SAMN04489866_11139 | single-stranded-DNA-specific exonuclease. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.867 |
| SDD79741.1 | dinB | SAMN04489866_10738 | SAMN04489866_11340 | single-stranded-DNA-specific exonuclease. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.683 |
| SDD79741.1 | nth | SAMN04489866_10738 | SAMN04489866_11240 | single-stranded-DNA-specific exonuclease. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.461 |
| SDD79741.1 | polA | SAMN04489866_10738 | SAMN04489866_11016 | single-stranded-DNA-specific exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.960 |
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