STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD29361.1DNA-binding transcriptional regulator, ArsR family. (106 aa)    
Predicted Functional Partners:
SDD29557.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.794
SDD29421.1
Arsenite transporter, ACR3 family.
  
  
 0.716
SDD29502.1
Hypothetical protein.
  
  
 0.616
SDD29599.1
Small redox-active disulfide protein 2.
     
 0.505
SDD90364.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.466
SDD29272.1
4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis.
       0.458
SDD29323.1
NTF2-like N-terminal transpeptidase domain-containing protein.
       0.453
SDD46500.1
Cu+-exporting ATPase.
  
  
 0.428
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.