STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD23498.1Peroxiredoxin (alkyl hydroperoxide reductase subunit C). (219 aa)    
Predicted Functional Partners:
SDD10378.1
Thioredoxin reductase (NADPH).
  
 
 0.996
SDE09347.1
Peroxiredoxin.
  
 0.940
SDD29599.1
Small redox-active disulfide protein 2.
  
 0.938
SDE05954.1
Thioredoxin reductase (NADPH).
  
 
 0.832
SDD95684.1
Thioredoxin reductase (NADPH).
  
 
 0.759
SDD31971.1
Catalase; Belongs to the catalase family.
  
 
 0.739
SDD24836.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.720
SDE05903.1
Fe2+ or Zn2+ uptake regulation protein; Belongs to the Fur family.
  
  
 0.628
SDD67518.1
Hypothetical protein.
  
 
 0.625
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.608
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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