STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD39798.1ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. (613 aa)    
Predicted Functional Partners:
SDD39745.1
Hypothetical protein.
 
  
  0.941
SDE02113.1
ATP-binding cassette, subfamily C, CydC.
 
 
0.903
SDD39841.1
ATP-binding cassette, subfamily C.
 
 
 
0.862
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.834
SDD67469.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.814
SDD55685.1
Putative ABC transport system ATP-binding protein.
 
    
0.810
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.788
SDD45099.1
Osmoprotectant transport system ATP-binding protein.
 
     
0.775
SDD40033.1
Iron complex transport system substrate-binding protein.
 
     0.724
SDD39893.1
Hypothetical protein.
       0.697
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.