STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD41146.1L-lactate dehydrogenase complex protein LldF. (477 aa)    
Predicted Functional Partners:
SDD41206.1
L-lactate dehydrogenase complex protein LldE.
 
 0.996
SDD41100.1
L-lactate dehydrogenase complex protein LldG.
 
 0.984
SDD90364.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.956
SDD24035.1
Uncharacterised ACR, YkgG family COG1556.
 
 
 0.906
SDD39504.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 
  0.797
SDE03545.1
Glycolate oxidase iron-sulfur subunit.
 
   0.764
SDD24158.1
Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.741
SDD92559.1
Nitrite and sulphite reductase 4Fe-4S domain-containing protein.
  
 
  0.576
SDD12687.1
Sulfide dehydrogenase (flavoprotein) subunit SudB.
  
  0.485
SDD32641.1
Dihydroorotate oxidase B, electron transfer subunit.
  
  0.485
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.