STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD41206.1L-lactate dehydrogenase complex protein LldE. (245 aa)    
Predicted Functional Partners:
SDD41146.1
L-lactate dehydrogenase complex protein LldF.
 
 0.996
SDD23994.1
L-lactate dehydrogenase complex protein LldF.
 
 0.989
SDD14201.1
L-lactate dehydrogenase complex protein LldG.
 
 0.988
SDD41100.1
L-lactate dehydrogenase complex protein LldG.
 
 0.986
SDD90364.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.931
SDD63967.1
Glycolate oxidase.
 
 
 
  0.916
SDD39504.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.902
SDD24035.1
Uncharacterised ACR, YkgG family COG1556.
 
 
 0.894
SDE03502.1
Glycolate oxidase.
 
 
 
  0.829
SDD24158.1
Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.716
Your Current Organism:
Peptococcus niger
NCBI taxonomy Id: 2741
Other names: ATCC 27731, DSM 20475, JCM 6506, Micrococcus niger, NCTC 11805, P. niger, VPI 7953
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